David Koslicki | Using the Earth-mover’s Distance to compare microbial communities | CGSI 2017

07/20/2017 @ 13:30-14:15
Research Talk by David Koslicki
Using the Earth-mover’s Distance to compare microbial communities
1. McClelland, J. and Koslicki, D., 2016. EMDUnifrac: Exact linear time computation of the Unifrac metric and identification of differentially abundant organisms. arXiv preprint arXiv:1611.04634.
2. Mangul, S. and Koslicki, D., 2016. Reference-free comparison of microbial communities via de Bruijn graphs. bioRxiv, p.055020.
3. Evans, S.N. and Matsen, F.A., 2012. The phylogenetic Kantorovich–Rubinstein metric for environmental sequence samples. Journal of the Royal Statistical Society: Series B (Statistical Methodology), 74(3), pp.569-592.